When air temperatures plunge in late autumn, lake water cools rapidly. This affects phytoplankton, the main source of chlorophyll in open water. The immediate response depends on mixing and species composition. A sudden cold snap can break down summer stratification, allowing wind to mix the water column.
Nutrients from deeper layers may reach the surface, but phytoplankton are also carried into darker depths where light is insufficient for photosynthesis。
In general, cooling slows metabolic rates and cell division. Warm-adapted cyanobacteria and green algae decline, and their chlorophyll degrades or sinks. As a result, surface chlorophyll-a concentrations often fall. However, the drop may not be uniform. Some cold-tolerant diatoms and cryptophytes can briefly benefit from increased nutrients and improved light if mixing is shallow, producing a small autumn bloom. This can cause a temporary rise in chlorophyll before winter conditions suppress growth.
Short day length and weaker sunlight also limit photosynthesis, reinforcing the downward trend. If the cold snap is accompanied by heavy rain or strong winds, sediment resuspension may increase turbidity, further reducing light and chlorophyll production. In shallow lakes, the effect can be rapid; in deep lakes, total chlorophyll may change less than surface readings because cells are redistributed through the water column.
Overall, a sudden late-autumn temperature drop usually lowers chlorophyll content in outdoor lakes. The decline is driven by reduced growth, cell death, sinking, and light limitation, though brief fluctuations are possible due to mixing and shifts toward cold-tolerant species.

